## ## package: ## ## pdbmanager_v10.tar.gz ## ## filename: ## ## ERR_MSGS.txt ## ## description: ## ## This file contains all the error messages for class CommandlineInterpreter ## used by the program PDBMANAGER. ## BEGIN_CI_ERR_MSG_0 SYNTAX ERROR: NULL POINTER AS PARAMETER! PDBMANAGER V. 1.0 DOES NOT SUPPORT THIS COMMAND! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_0 BEGIN_CI_ERR_MSG_1 SYNTAX ERROR: UNKNOWN COMMAND PDBMANAGER V. 1.0 DOES NOT SUPPORT THIS COMMAND! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_1 BEGIN_CI_ERR_MSG_2 SYNTAX ERROR: NEGATIVE INDEX! PDBMANAGER V. 1.0 CHECKS THAT ARRAY BOUNDARIES ARE NOT CROSSED! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_2 BEGIN_CI_ERR_MSG_3 SYNTAX ERROR: INDEX TOO LARGE! PDBMANAGER V. 1.0 CHECKS THAT ARRAY BOUNDARIES ARE NOT CROSSED! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_3 BEGIN_CI_ERR_MSG_4 SYNTAX ERROR: VARIABLE IS EMPTY! PDBMANAGER V. 1.0 CHECKS THAT THE VARIABLES ARE VALID! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_4 BEGIN_CI_ERR_MSG_5 SYNTAX ERROR: UNKNOWN INPUT/OUTPUT FORMAT FOR PDBMANAGER V. 1.0 ALLOWS ONLY PDB AND XYZ FORMATS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_5 BEGIN_CI_ERR_MSG_7 SYNTAX ERROR: WRONG NUMBER OF ARGUMENTS IN COMMAND PDBMANAGER V. 1.0 CHECKS THAT COMMANDS HAVE RIGHT NUMBER OF ARGUMENTS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_7 BEGIN_CI_ERR_MSG_8 SYNTAX ERROR: UNKNOWN CLASS TYPE PDBMANAGER V. 1.0 DOES NOT SUPPORT THIS CLASS TYPE! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_8 BEGIN_CI_ERR_MSG_9 SYNTAX ERROR: VARIABLE IS UNDEFINED! PDBMANAGER V. 1.0 DOES NOT ALLOW UNDEFINED VARIABLES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_9 BEGIN_CI_ERR_MSG_10 SYNTAX ERROR: COULD NOT OPEN THE FILE PDBMANAGER V. 1.0 CHECKS THE FILE OPERATIONS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_10 BEGIN_CI_ERR_MSG_11 SYNTAX ERROR: VARIABLE IS ALREADY DEFINED! PDBMANAGER V. 1.0 SUPPORTS ONLY UNIQUELY DEFINED VARIABLE NAMES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_11 BEGIN_CI_ERR_MSG_12 SYNTAX ERROR: MISMATCHING '-TOKENS WHEN WRITING CHARACTER STRING! PDBMANAGER V. 1.0 REQUIRES THAT ALL CHARACTER STRINGS ARE GIVEN BETWEEN TWO '-tokens! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_12 BEGIN_CI_ERR_MSG_13 SYNTAX ERROR: WRONG COMMAND OPTION FOR THE COMMAND! PDBMANAGER V. 1.0 ALLOWS ONLY SPECIFIC OPTIONS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_13 BEGIN_CI_ERR_MSG_14 SYNTAX ERROR: COULD NOT FIND PDBDATA RECORD PDBMANAGER V. 1.0 CHECKS THAT ONLY VALID PDBDATA RECORDS ARE USED! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_14 BEGIN_CI_ERR_MSG_15 SYNTAX ERROR: WRONG CLASS FOR THE COMMAND! PDBMANAGER V. 1.0 CHECKS THAT VARIABLE OPTION IS OF RIGHT CLASS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_15 BEGIN_CI_ERR_MSG_16 SYNTAX ERROR: THE FILE IS NOT VALID PDBMANAGER VARIABLES STORAGE FILE! PDBMANAGER V. 1.0 CHECKS THAT THE FILE FORMATS ARE CORRECT! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_16 BEGIN_CI_ERR_MSG_17 SYNTAX ERROR: COMMAND ARGUMENT IS NOT VALID INTEGER VALUE! PDBMANAGER V. 1.0 CHECKS THAT COMMAND OPTIONS HAVE VALID NUMERICAL VALUES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_17 BEGIN_CI_ERR_MSG_18 SYNTAX ERROR: COMMAND ARGUMENT IS NOT VALID FLOATING POINT VALUE! PDBMANAGER V. 1.0 CHECKS THAT COMMAND OPTIONS HAVE VALID NUMERICAL VALUES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_18 BEGIN_CI_ERR_MSG_19 SYNTAX ERROR: FLOATING POINT VALUE OUT OF RANGE! PDBMANAGER V. 1.0 CHECKS THAT COMMAND OPTIONS HAVE VALID NUMERICAL VALUES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_19 BEGIN_CI_ERR_MSG_20 SYNTAX ERROR: INTEGER VALUE OUT OF RANGE! PDBMANAGER V. 1.0 CHECKS THAT COMMAND OPTIONS HAVE VALID NUMERICAL VALUES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_20 BEGIN_CI_ERR_MSG_21 SYNTAX ERROR: WRONG MODEL TYPE FOR THE ATOMICMODEL VARIABLE! PDBMANAGER V. 1.0 CHECKS THAT ATOMICMODEL VARIABLES HAVE RIGHT MODEL TYPES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_21 BEGIN_CI_ERR_MSG_22 SYNTAX ERROR: WRONG ATOMICMODEL MODEL TYPE FOR COMMAND! PDBMANAGER V. 1.0 CHECKS THAT ATOMICMODEL VARIABLES HAVE RIGHT MODEL TYPES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_22 BEGIN_CI_ERR_MSG_23 SYNTAX ERROR: NO SELECTED COORDINATES IN THE ATOMICMODEL VARIABLE PDBMANAGER V. 1.0 CHECKS THAT ATOMICMODEL VARIABLES HAVE SELECTED ATOMS IF NECESSARY! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_23 BEGIN_CI_ERR_MSG_24 SYNTAX ERROR: TWO EXACTLY SAME POINTS IN THE ATOMICMODEL VARIABLE PDBMANAGER V. 1.0 CHECKS THAT ATOMICMODELS DO NOT CONTAIN TWO EXACTLY SAME POINTS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_24 BEGIN_CI_ERR_MSG_25 SYNTAX ERROR: MAX R IN THE P(R)_FUNCTION MUST BE LARGER THAN MAXIMUM DISTANCE IN THE CLUSTER PDBMANAGER V. 1.0 CHECKS THAT FUNCTIONS HAVE ONLY ALLOWED VALUES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_25 BEGIN_CI_ERR_MSG_26 SYNTAX ERROR: COULD NOT OPEN THE DIRECTORY PDBMANAGER V. 1.0 CHECKS THE FILE OPERATIONS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_26 BEGIN_CI_ERR_MSG_27 SYNTAX ERROR: COULD NOT MAKE THE DIRECTORY THE DIRECTORY ALREADY EXISTS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_27 BEGIN_CI_ERR_MSG_28 SYNTAX ERROR: COULD NOT MAKE THE DIRECTORY PLEASE CHECK WRITING PERMISSION! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_28 BEGIN_CI_ERR_MSG_29 SYNTAX ERROR: COULD NOT COPY THE FILE PDBMANAGER V. 1.0 CHECKS THE FILE OPERATIONS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_29 BEGIN_CI_ERR_MSG_30 SYNTAX ERROR: COULD NOT REMOVE THE FILE PDBMANAGER V. 1.0 CHECKS THE FILE OPERATIONS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_30 BEGIN_CI_ERR_MSG_31 SYNTAX ERROR: COULD NOT REMOVE THE FILE DIRECTORY DOES NOT EXIST! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_31 BEGIN_CI_ERR_MSG_32 SYNTAX ERROR: COULD NOT EXECUTE VIEWER COMMAND! THE VIEWER PROCESS IS NOT RUNNING! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_32 BEGIN_CI_ERR_MSG_33 SYNTAX ERROR: COULD NOT START NEW VIEWER! CLOSE THE OLD VIEWER FIRST! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_33 BEGIN_CI_ERR_MSG_34 SYNTAX ERROR: COMMAND IS CURRENTLY DISABLED! CHANGE THE FILE ENVIRONMENT.txt TO ENABLE THE COMMAND! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_34 BEGIN_CI_ERR_MSG_35 SYNTAX ERROR: COULD NOT EXECUTE MATH COMMAND! THE MATH PROCESS IS NOT RUNNING! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_35 BEGIN_CI_ERR_MSG_36 SYNTAX ERROR: COULD NOT START NEW MATH PROGRAM! CLOSE THE OLD MATH PROGRAM FIRST! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_36 BEGIN_CI_ERR_MSG_37 SYNTAX ERROR: COULD NOT EXECUTE EDITOR COMMAND! THE EDITOR PROCESS IS NOT RUNNING! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_37 BEGIN_CI_ERR_MSG_38 SYNTAX ERROR: COULD NOT START NEW EDITOR PROGRAM! CLOSE THE OLD EDITOR PROGRAM FIRST! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_38 BEGIN_CI_ERR_MSG_39 SYNTAX ERROR: INVALID SUBSTR SYNTAX! CORRECT SYNTAX: string.substr(int,int) SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_39 BEGIN_CI_ERR_MSG_40 SYNTAX ERROR: COULD NOT SAVE RICH TEXT TO THE FILE CHECK WRITING PERMISSIONS AND FILE EXTENSION! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_40 BEGIN_CI_ERR_MSG_41 THREAD ERROR: THE NEXT ERROR MESSAGE COMES FROM DIFFERENT THREAD! THREAD WAS NOT COMPLETED SUCCESFULLY! END_CI_ERR_MSG_41 BEGIN_CI_ERR_MSG_42 THREAD ERROR: COULD NOT CREATE THREAD! THERE MAY NOT BE ENOUGH RESOURCES AVAILABLE ON SYSTEM OR THE THREAD IS ALREADY RUNNING! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_42 BEGIN_CI_ERR_MSG_43 THREAD ERROR: COULD NOT CREATE THREAD! NOT ENOUGH SYSTEM RESOURCES AVAILABLE! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_43 BEGIN_CI_ERR_MSG_44 THREAD ERROR: COULD NOT CREATE THREAD! THE THREAD IS ALREADY RUNNING! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_44 BEGIN_CI_ERR_MSG_45 SYNTAX ERROR: GENERATOR IS EMPTY IN COMMAND cryst! COULD NOT GENERATE THE CRYSTAL! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_45 BEGIN_CI_ERR_MSG_46 SYNTAX ERROR: NO ATOMICMODEL VARIABLES GIVEN FOR COMMAND cryst! COULD NOT GENERATE THE CRYSTAL! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_46 BEGIN_CI_ERR_MSG_47 SYNTAX ERROR: EMPTY SELECTION FOR generate IN COMMAND cryst! COULD NOT GENERATE THE CRYSTAL! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_47 BEGIN_CI_ERR_MSG_48 SYNTAX ERROR: EMPTY BASE VECTORS IN GENERATOR IN COMMAND cryst! COULD NOT GENERATE THE CRYSTAL! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_48 BEGIN_CI_ERR_MSG_49 SYNTAX ERROR: MISMATCHING SIZE FOR ATOMICMODEL VARIABLES AND BASE VECTORS IN COMMAND cryst! THEY SHOULD BE OF THE SAME SIZE! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_49 BEGIN_CI_ERR_MSG_50 SYNTAX ERROR: COULD NOT SAVE VARIABLES TO THE FILE! ALL THE VARIABLES WERE EMPTY! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_50 BEGIN_CI_ERR_MSG_51 SYNTAX ERROR: VARIABLE WAS EMPTY AND NOT SAVED TO FILE! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_51 BEGIN_CI_ERR_MSG_52 SYNTAX ERROR: COULD NOT SAVE VARIABLES TO THE FILE! THERE ARE NO VARIABLES DEFINED! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_52 BEGIN_CI_ERR_MSG_53 SYNTAX ERROR: VARIABLE HAS '-TOKENS IN IT'S NAME! THIS COMMAND DOES NOT SUPPORT VARIABLE NAMES WITH '-TOKENS! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_53 BEGIN_CI_ERR_MSG_54 SYNTAX ERROR: COULD NOT SET PDBDATA RECORD FROM STRINGVECTOR! CHECK THAT THE RECORD HAS VALID NAME! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_54 BEGIN_CI_ERR_MSG_55 SYNTAX ERROR: COULD NOT SET PDBDATA RECORD FROM STRINGVECTOR! CHECK THAT STRINGVECTOR HAS EXACTLY ONE ELEMENT! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_55 BEGIN_CI_ERR_MSG_56 SYNTAX ERROR: INVALID INPUT STRING CONTENT IN COMMAND rotate! CHECK THAT EVERY PARAMETER IS SEPARATED BY EMPTY SPACES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_56 BEGIN_CI_ERR_MSG_57 SYNTAX ERROR: INVALID INPUT ROTATORS CONTENT IN COMMAND cryst! CHECK THAT GIVEN ROTATOR INDEXES ARE VALID! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_57 BEGIN_CI_ERR_MSG_58 SYNTAX ERROR: INVALID INPUT STRING CONTENT IN COMMAND move! CHECK THAT EVERY PARAMETER IS SEPARATED BY EMPTY SPACES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_58 BEGIN_CI_ERR_MSG_59 SYNTAX ERROR: INVALID INPUT STRING CONTENT IN COMMAND cryst! CHECK THAT EVERY PARAMETER IS SEPARATED BY EMPTY SPACES! SEE PROGRAM MANUAL FOR CORRECT SYNTAX! END_CI_ERR_MSG_59 BEGIN_CI_ERR_MSG_60 SYNTAX ERROR: TOO LONG COMMAND STRING IN COMMAND EXPANSION OF *-TOKEN IS LIMITED TO 1000 CHARACTERS. END_CI_ERR_MSG_60 BEGIN_CI_ERR_MSG_61 SYNTAX ERROR: UNKNOWN SPACE GROUP FOR COMMAND symmetry! ONLY SPACE GROUPS 1-230 OR ACCORDING TO X-PLOR/CNS NOTATION ALLOWED! END_CI_ERR_MSG_61 BEGIN_CI_ERR_MSG_62 INVALID FILE ERROR: INVALID RESOURCE FILE SPACEGROUPS.txt! END_CI_ERR_MSG_62 BEGIN_CI_ERR_MSG_63 SYNTAX ERROR: WRONG NUMBER OF ATOMICMODELS GIVEN FOR SPACE GROUP! PDBMANAGER CHECKS THAT THE CORRECT NUMBER OF ATOMICMODELS ARE GIVEN FOR COMMAND symmetry! END_CI_ERR_MSG_63 BEGIN_CI_ERR_MSG_64 SYNTAX ERROR: EMPTY ATOMICMODEL VARIABLE GIVEN FOR THE COMMAND symmetry! SYMMETRY TRANSFORMATIONS ARE DONE ACCORDING TO FIRST ATOMICMODEL VARIABLE THEREFORE IT SHOULD NOT BE EMPTY! END_CI_ERR_MSG_64